What's happening at the Krembil Centre for Neuroinformatics?

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Missed the Spring 2023 bulletin? Read it here.

 
 
 
 
 

David Rotenberg
Director of Operations,  Krembil Centre for Neuroinformatics (KCNI), Director, Data Strategy and Business Intelligence, CAMH

 

Email Us:
Krembil.Centre@camh.ca for questions, feedback and to learn more about the KCNI!

 
 

A message from David Rotenberg:

A significant focus of our work this past year has been expanding the reach of the KCNI and leading pan-Canadian data initiatives benefitting people across the country.

The Brain Canada Youth Insight platform, which launched last fall, continues to gain momentum as we recruit for key roles and the procurement process for the underlying data fabric is finalized. In addition, we are expanding our scope to facilitate services provided outside our walls including leading the data and analytics implementation of 9-8-8, Canada’s new suicide prevention line launching in November. We are also developing the data platform for the Hub in Cardio-Neuro-Mind Research, based at the University of Ottawa, set to uncover linkages between brain and heart diseases, which impact over six million Canadians.

Our scientist teams are growing translational impact through their groundbreaking research and offering unique education and development programming. The opportunity to collaborate and learn with them draws the brightest minds from around the world to advance the latest breakthroughs in data-driven mental health research. 

Finally, as you know, Dr. Sean Hill has accepted an exciting new role in Switzerland into which he will transition over the coming year. We deeply appreciate his incredible leadership and contributions to CAMH over the past six highly productive years and wish him all the best. 

 
 

Featured Highlights

 
 
 

BMO Invests in CAMH's Krembil Centre for Neuroinformatics and Research & Discovery Centre  

From left:  Deborah Gillis, President & CEO, CAMH Foundation; Sharon Haward-Laird, Group Head & General Counsel and Executive Champion of Diversity, Equity and Inclusion, BMO; Sarah Downey, President & CEO, CAMH; Angie Elliott, Mental Health Advocate and Former CAMH Patient; David Rotenberg, Operations Director, KCNI; Dr. Laura Sikstrom, Project Scientist, KCNI; and Dr. Aristotle Voineskos,  Vice President of Research, CAMH.

We are thrilled to celebrate a $5 million transformational gift from BMO to support research in CAMH’s Krembil Centre for Neuroinformatics and to help build a new leading Research & Discovery Centre.

BMO’s visionary support will help CAMH save lives through harnessing the power of innovative technologies, including artificial intelligence, big data and neuroinformatics, to deliver more effective and equitable mental healthcare solutions for the people we serve. Thank you BMO for your ongoing commitment, generosity and support, and for helping CAMH build a future where no one is left behind.
 

 
 
 
 
 

9-8-8  Launching in November

KCNI Data Analytics Will Be Used to Save Lives

 

Starting November 30, 2023, people across Canada will be able to call and text 9-8-8: Suicide Crisis Helpline for support when they need it most. CAMH is leading and coordinating the national roll-out of 9-8-8, which will be available in French or English, 24/7, 365 days a year to anyone in Canada who is thinking about suicide or who is worried about someone they know. 


The CAMH data team is leading the data and analytics implementation of 9-8-8. The team is creating a centralized database to support analytics and reporting across the service, and will leverage an advanced analytics tool for the roll-out this November.

 
 
 
 
 

Digital Front Door 

Improving Pathways to care 

The BrainHealth Databank team—in collaboration with patients and families, clinicians, administrators, technology experts, researchers and vendors—is advancing the development and implementation of a Digital Front Door platform to digitize the patient journey and to support integrated measurement-based care (MBC). The purpose of the platform will be to enable a single-point of entry for CAMH patients and families to receive information and services, relating both to their clinical care and participation in research. Launching later in the fall, the platform will align with measurement-based care as well as virtual care, and include features seen in traditional patient portals.
 

 
 
 

KCNI Awards & Accomplishments

 

Using KCNI Computer Models to Understand the Potential of and Biomarkers for New Treatments


The KCNI laboratories of Drs. Etay Hay and Shreejoy Tripathy are collaborating with Damona Pharmaceuticals (a preclinical pharmaceutical company founded by Dr. Etienne Sibill at CAMH)  to develop electroencephalogram (EEG) (Hay Lab) and genetic (Tripathy Lab) biomarkers for the drugs developed at Damona, using computational models.


In Dr. Hay's project, he is testing the ability of a new drug called α5-PAM, which boosts the connections of certain brain cells that are linked to depression. It is not known howα5-PAM affects the human brain because it currently cannot be tested in the living human brain. 
Working in collaboration with Damona scientists, Dr. Hay used 
detailed computer models to simulate α5-PAM's effects on human brain cells and networks. The simulations showed that α5-PAM can recover function in depression brain networks. The project also identified biomarkers in EEG brain signals that can predict dose response and help measure the drug's efficacy.

Dr. Tripathy is collaborating with Damona to better understand changes in brain cells as people age into late life. Currently, a major challenge limiting the development and application of therapies for brain disorders is the inaccessibility of the human brain for diagnostic biopsies. Unlike in conditions such as cancer where biopsies often guide life-changing treatments, it is challenging to link an individual patient’s brain disorder to its underlying cellular cause. As a result, disorders like major depression with effective treatments can require multiple rounds of trial and error to find fruitful drugs and dosing strategies for each patient.
Dr. Tripathy and his collaborators will apply this knowledge to develop biomarkers that can predict a patient’s degree of neuron-specific vulnerability using simple, routinely-accessible assays, like genetics and brain imaging. They ultimately aim for these approaches to deliver on the promise of personalized medicine for brain disorders by helping guide treatment decisions in the clinic.

 
 
 
 
 
 

          Dr. Etay Hay,        Project Scientist at the KCNI Computational Model of Cortical Circuits ,Lab Lead

          Dr. Shreejoy Trip,        Scientist at the KCNI, Computational Genomics, Lab Lead

 

Principal Investigators' Block       

The Impact of Cultural Models Of Addiction and Motherhood: A Cross-Cultural Study

This fall, Drs. Laura Sikstrom and Sara Ling, will kick off an international, multi-site study that focuses on how cultural models of addiction and motherhood impact psychological well-being and other recovery indicators in mothers. The project will take place at treatment centres in Canada, the Netherlands and England.
Ultimately, Drs. Sikstrom and Ling’s aim is to reduce the stigma and increase knowledge about drug use in motherhood across the study populations by generating information about the role cultural models of addiction and motherhood have on harm reduction and recovery outcomes. The research will inform cross-national discussions with legislators and other experts that aim to reduce barriers to care for women. 
“Sara and I first started talking about motherhood and addiction when Sara noted barriers to care for mothers,” says Dr. Sikstrom. “I mentioned a service in Alberta—where I am from—that houses mother and their young children during medical withdrawal, since they found that women didn’t access care unless they took a family-centred approach. We thought this was an important area to examine, especially with a prevalent ‘mommy drinks because…’ culture in both North America and Europe.”

This project focuses on these high-income countries because they are similar in terms of gender parity, and opioid and substance  use have reached epidemic proportions in each, including deaths due to drug overdoses and drug-related hospitalizations. All three countries have a mission to reduce illicit drug use and have increased governmental funding to tackle drug-related issues; however, each is taking a slightly different approach (e.g., drug legalization, supervised consumption sites, etc.) It is expected that this study will facilitate cross-national insight into which treatment approaches are working, and how cultural models influence psychological well-being, harm reduction and other indicators among mothers and women of childbearing age.


The information gained from this study will be collated and disseminated through a series of virtual panels and public talks with legislators and other interested parties. In addition, the findings from this study will inform other research initiatives led by Drs. Ling and Sikstrom that are under review from funding agencies, e.g. CIHR, that will explore using digital tools (like mobile apps) to provide more gender responsive substance use services.

 
 
 

 Dr. Laura Sikstrom   Project Scientist, Predictive Care Team at the KCNI

 

 

      Dr. Sara Ling

  Project Scientist, Predictive Care Team at the KCNI

 

TRAINEE HIGHLIGHT 

Gabrielle Allohverdi 

 

Gabrielle Allohverdi obtained a BSc, with a major in biology from the University of Western Ontario in 2020. During her undergraduate years, Gabrielle studied neuroscience, neuroimaging data analysis and the psychology of altered states of consciousness. She spent time as a research assistant under Dr. Elizabeth Hayden studying the effect of maternal psychiatric diagnosis on child affect, and Dr. Graham Reid whose lab focuses on access and use of services for youth with mental health diagnoses.

Currently, Gabrielle is completing a Masters at the Institute for Medical Science at the University of Toronto. Gabrielle is working on a project that investigates the effect of hallucinogens on sensory learning and cognition. She is interested in the application of generative models to non-invasive neuroimaging data to understand the antidepressant effects of drugs like ketamine and psilocybin. Additionally, she is interested in ketamine as a model of prodromal psychosis, looking for patterns between the symptomatology of psychosis and the dissociative state under ketamine.

In her free time, Gabrielle enjoys playing the electric guitar alongside recording covers of classic 60’s folk songs. She also enjoys music trivia and loves attending small shows around Toronto.

 

 

Gabrielle Allohverdi
MSc Student

Cognitive Network Modelling Lab - 
Diaconescu

 
 

Activity Updates

Scientific Computing workshops / speaker series 

November 27 - 30th 

The Krembil Centre for Neuroinformatics (KCNI) and the Scientific Computing Working Group (SCWG) is proud to present its semi-annual workshop series.

Our research is increasingly more computationally-driven and training is often not part of the core curriculum for biomedical/medical science degrees. The KCNI, in collaboration with the Scientific Computing Workshops at CAMH are focused on building computing skills and fundamentals to help organize study data, automate repeatable/reproducible analyses, and make use of CAMH computing resources to save time.

This multi-day, virtual workshop series offers a range of topics and supports different levels of experience. This season’s topics include basic and intermediate coding skills, introduction to REDCap, and others.

For CAMH Staff: reach out to Marcos Sanches  to register

For public attendees: More information and registration here!

 

Scientific Computing workshops / speaker series  

The Krembil Centre for Neuroinformatics at CAMH is pleased to announce our ongoing Speaker Series will be moving to hybrid events. 

The series features speakers from a wide range of backgrounds, expressing the diversity of the Krembil Centre’s scientific breadth. Each month we will hear a new perspective on the current state of multi-scale neuroscience, from gene to circuits, from brain dynamics to cognitive modeling and populations.

Send us a message if you would like to be added to the invite list

Upcoming Speakers: 

DR. Abigail Ortiz - General Adult Psychiatry and Health Systems - CAMH - December 14th 

DR. Stephen Scherer - Chief of Research SickKids - February 1st 2024

 

 
 
 
 

Featured Publications

 Investigating microglia-neuron crosstalk by characterizing microglial contamination in human and mouse patch-seq datasets. iScience. Arbabi, K. et al.                                                                                        
Identification of brain cell types underlying genetic association with word reading and correlated traits. Mol. Psychiatry.  Price, K. M. et al.                                                                                       
Chrna5 is a marker of acetylcholine super-responder subplate neurons with specialized expression of nicotinic modulator proteins. Venkatesan, S., Chen, T., Liu, Y., Turner, E. E. & Tripathy, S.  https://europepmc.org/article/ppr/ppr508445                                                                                                  
Fragmentation of rest periods, astrocyte activation, and cognitive decline in older adults with and without Alzheimer’s disease. Alzheimers. Dementia,  Wu, R. et al.                                                                 
Experiences of patient-initiated discharge from an inpatient withdrawal management service: a qualitative descriptive study. J. Subst. Use Ling, S., Puts, M., Sproule, B. & Cleverley, K.                                                                                                                
Out with AI, in with the psychiatrist: a preference for human-derived clinical decision support in depression care. Transl. Psychiatry Maslej, M. M., Kloiber, S., Ghassemi, M., Yu, J. & Hill, S. L.

More Publications
 
 

In The Media

David Rotenberg Named 40 under 40 Data leader by CDO magazine Nominations and Lists | 40 Under 40 Data Leaders 2023 List 

 
 
 
 
 

About Us

The Krembil Centre for Neuroinformatics collaborates globally to collect and integrate large-scale brain research data, apply machine learning and artificial intelligence, and develop multiscale computational models that can transform our understanding of brain disorders. Our open, team science approach focuses on bridging the levels of the brain, from genes to circuits and from whole brains to the whole person, in order to better define, prevent and treat mental illnesses.

Learn more at
www.krembilneuroinformatics.ca

 
 

Want to Join Our Team?  KCNI is always looking for scientists, post-doctoral fellows, grad students, coordinators, and more!

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#KrembilNeuroinformatics is putting today’s most advanced technology to work on this universal task that will unlock the power of personalized medicine to change the world.

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The Krembil Centre for Neuroinformatics
Centre for Addiction and Mental Health
 
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